Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim65Q8BFW4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gm43378-201ENSMUST00000199336 582 ntBASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Mir7686-201ENSMUST00000200604 57 ntBASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Olfr584-201ENSMUST00000098210 964 ntBASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trim65Q8BFW4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.18□□□□□ -0.46
Trim65Q8BFW4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm9062-201ENSMUST00000117712 727 ntBASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm12463-201ENSMUST00000118271 849 ntBASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm15617-201ENSMUST00000118973 771 ntBASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm11244-201ENSMUST00000121243 237 ntBASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm22144-201ENSMUST00000157402 102 ntBASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm9353-201ENSMUST00000200472 604 ntBASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm18753-201ENSMUST00000201000 566 ntBASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim65Q8BFW4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms