Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm11949-201ENSMUST00000117640 372 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm8111-201ENSMUST00000117659 987 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm10051-201ENSMUST00000145209 414 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm19246-201ENSMUST00000173599 255 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm23694-201ENSMUST00000179335 110 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Mir6546-201ENSMUST00000184460 62 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rpp38Q80UU2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm15573-201ENSMUST00000119487 540 ntBASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm20426-201ENSMUST00000173657 440 ntBASIC11.38□□□□□ -0.59
Rpp38Q80UU2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm45398-201ENSMUST00000210561 165 ntBASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpp38Q80UU2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms