Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Snrnp40Q6PE01 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Snord23-201ENSMUST00000116828 109 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm6630-201ENSMUST00000119199 454 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm13204-201ENSMUST00000120110 821 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm5529-201ENSMUST00000165691 891 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm43506-201ENSMUST00000200675 753 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm2448-201ENSMUST00000207080 559 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Snrnp40Q6PE01 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm11475-201ENSMUST00000118482 476 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm15136-201ENSMUST00000120552 533 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm16459-201ENSMUST00000121443 686 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms