Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm2474-201ENSMUST00000195162 559 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Slx4Q6P1D7 AC133517.1-201ENSMUST00000225825 594 ntBASIC17.28■□□□□ 0.36
Slx4Q6P1D7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC17.27■□□□□ 0.36
Slx4Q6P1D7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Gm11919-201ENSMUST00000117609 721 ntBASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Gm5510-201ENSMUST00000117826 486 ntBASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Gm12345-201ENSMUST00000119288 898 ntBASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Gm14176-201ENSMUST00000121302 477 ntBASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Gm22388-201ENSMUST00000158194 248 ntBASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Gm10238-201ENSMUST00000089689 408 ntBASIC17.27■□□□□ 0.35
Slx4Q6P1D7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Gm37844-201ENSMUST00000192473 4097 ntBASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Gm6238-201ENSMUST00000120999 465 ntBASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 AC134793.1-202ENSMUST00000227444 803 ntBASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slx4Q6P1D7 AC155245.1-201ENSMUST00000222266 1804 ntBASIC17.26■□□□□ 0.35
Slx4Q6P1D7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Gm42829-201ENSMUST00000198417 2585 ntBASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 AC151836.1-201ENSMUST00000228730 1637 ntBASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Slx4Q6P1D7 AC241616.1-201ENSMUST00000213741 166 ntBASIC17.25■□□□□ 0.35
Slx4Q6P1D7 Gm8170-201ENSMUST00000218581 945 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms