Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Gm42826-201ENSMUST00000197548 2639 ntBASIC11.27□□□□□ -0.6
Tmed1Q3V009 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tmed1Q3V009 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tmed1Q3V009 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tmed1Q3V009 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Tmed1Q3V009 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Tmed1Q3V009 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Tmed1Q3V009 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.27□□□□□ -0.6
Tmed1Q3V009 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm25214-201ENSMUST00000104573 129 ntBASIC11.27□□□□□ -0.61
Tmed1Q3V009 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm4986-201ENSMUST00000119731 549 ntBASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm26956-201ENSMUST00000182176 986 ntBASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm37424-201ENSMUST00000191727 561 ntBASIC11.27□□□□□ -0.61
Tmed1Q3V009 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tmed1Q3V009 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Tmed1Q3V009 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.26□□□□□ -0.61
Tmed1Q3V009 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm11222-201ENSMUST00000119005 738 ntBASIC11.26□□□□□ -0.61
Tmed1Q3V009 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.26□□□□□ -0.61
Tmed1Q3V009 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm37489-201ENSMUST00000191883 159 ntBASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm43433-201ENSMUST00000196573 481 ntBASIC11.26□□□□□ -0.61
Tmed1Q3V009 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.26□□□□□ -0.61
Tmed1Q3V009 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.26□□□□□ -0.61
Tmed1Q3V009 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tmed1Q3V009 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms