Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.33□□□□□ -0.44
Col9a2Q07643 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Gm43752-201ENSMUST00000198475 697 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 Gm43249-201ENSMUST00000200464 458 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 Gm43912-201ENSMUST00000204352 538 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 Id2-203ENSMUST00000222667 958 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.32□□□□□ -0.44
Col9a2Q07643 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Gm16030-201ENSMUST00000159098 603 ntBASIC12.32□□□□□ -0.44
Col9a2Q07643 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Gm19246-201ENSMUST00000173599 255 ntBASIC12.32□□□□□ -0.44
Col9a2Q07643 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.32□□□□□ -0.44
Col9a2Q07643 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.32□□□□□ -0.44
Col9a2Q07643 Gm43966-201ENSMUST00000203301 612 ntBASIC12.32□□□□□ -0.44
Col9a2Q07643 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Col9a2Q07643 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.32□□□□□ -0.44
Col9a2Q07643 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col9a2Q07643 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.32□□□□□ -0.44
Col9a2Q07643 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.31□□□□□ -0.44
Col9a2Q07643 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.31□□□□□ -0.44
Col9a2Q07643 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm13600-201ENSMUST00000117949 744 ntBASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm22379-201ENSMUST00000157480 131 ntBASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm25604-201ENSMUST00000158359 133 ntBASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm26976-201ENSMUST00000182929 908 ntBASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.31□□□□□ -0.44
Col9a2Q07643 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms