Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm14900-201ENSMUST00000120304 733 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm9089-201ENSMUST00000122027 526 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm23582-201ENSMUST00000158530 139 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm6611-201ENSMUST00000163830 1272 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm17221-201ENSMUST00000163909 481 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm17073-201ENSMUST00000168069 556 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28466-201ENSMUST00000190678 659 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm43036-201ENSMUST00000200594 373 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm8574-201ENSMUST00000203207 924 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm43905-201ENSMUST00000204516 204 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 AC164612.2-201ENSMUST00000215737 719 ntTSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.65□□□□□ -0.54
Col9a1Q05722 AC124356.1-201ENSMUST00000221469 698 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 AC160109.1-201ENSMUST00000225592 729 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 AC170810.2-201ENSMUST00000228384 1232 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.65□□□□□ -0.54
Col9a1Q05722 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col9a1Q05722 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Col9a1Q05722 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Col9a1Q05722 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Col9a1Q05722 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col9a1Q05722 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col9a1Q05722 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Col9a1Q05722 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm43221-201ENSMUST00000197612 2071 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Col9a1Q05722 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.64□□□□□ -0.55
Col9a1Q05722 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm22937-201ENSMUST00000103954 131 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm12096-201ENSMUST00000121149 829 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm16411-201ENSMUST00000122164 1100 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Mir6934-201ENSMUST00000183965 62 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm29663-201ENSMUST00000186962 853 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm31123-201ENSMUST00000192094 666 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm37054-201ENSMUST00000193481 543 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms