Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Smn1P97801 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.74□□□□□ -0.85
Smn1P97801 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.74□□□□□ -0.85
Smn1P97801 Gm27046-201ENSMUST00000182160 463 ntBASIC9.74□□□□□ -0.85
Smn1P97801 Mir8093-201ENSMUST00000185043 137 ntBASIC9.74□□□□□ -0.85
Smn1P97801 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.74□□□□□ -0.85
Smn1P97801 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.74□□□□□ -0.85
Smn1P97801 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.74□□□□□ -0.85
Smn1P97801 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.74□□□□□ -0.85
Smn1P97801 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Smn1P97801 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Smn1P97801 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.74□□□□□ -0.85
Smn1P97801 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.74□□□□□ -0.85
Smn1P97801 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.74□□□□□ -0.85
Smn1P97801 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.74□□□□□ -0.85
Smn1P97801 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smn1P97801 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Smn1P97801 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.73□□□□□ -0.85
Smn1P97801 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Gm27572-201ENSMUST00000183702 255 ntBASIC9.73□□□□□ -0.85
Smn1P97801 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.73□□□□□ -0.85
Smn1P97801 Gm38117-201ENSMUST00000194653 939 ntBASIC9.73□□□□□ -0.85
Smn1P97801 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.73□□□□□ -0.85
Smn1P97801 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.73□□□□□ -0.85
Smn1P97801 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Smn1P97801 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.73□□□□□ -0.85
Smn1P97801 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Smn1P97801 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.73□□□□□ -0.85
Smn1P97801 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.73□□□□□ -0.85
Smn1P97801 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Smn1P97801 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smn1P97801 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Smn1P97801 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.72□□□□□ -0.85
Smn1P97801 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Smn1P97801 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smn1P97801 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms