Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC18.32■□□□□ 0.52
Cux2P70298 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC18.32■□□□□ 0.52
Cux2P70298 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC18.32■□□□□ 0.52
Cux2P70298 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 AC164614.1-201ENSMUST00000216038 397 ntBASIC18.32■□□□□ 0.52
Cux2P70298 Gm8796-201ENSMUST00000219122 936 ntBASIC18.32■□□□□ 0.52
Cux2P70298 CT009550.1-201ENSMUST00000225750 864 ntBASIC18.32■□□□□ 0.52
Cux2P70298 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cux2P70298 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cux2P70298 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cux2P70298 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Fam220-ps-201ENSMUST00000116535 783 ntBASIC18.32■□□□□ 0.52
Cux2P70298 Gm14650-201ENSMUST00000120400 889 ntBASIC18.32■□□□□ 0.52
Cux2P70298 Gm15031-201ENSMUST00000121341 210 ntBASIC18.32■□□□□ 0.52
Cux2P70298 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC18.32■□□□□ 0.52
Cux2P70298 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC18.32■□□□□ 0.52
Cux2P70298 Gm5274-201ENSMUST00000182641 1003 ntBASIC18.32■□□□□ 0.52
Cux2P70298 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Gm18862-201ENSMUST00000204643 933 ntBASIC18.32■□□□□ 0.52
Cux2P70298 AC141884.2-201ENSMUST00000228811 775 ntBASIC18.32■□□□□ 0.52
Cux2P70298 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cux2P70298 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cux2P70298 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Gm16210-201ENSMUST00000122161 610 ntBASIC18.31■□□□□ 0.52
Cux2P70298 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC18.31■□□□□ 0.52
Cux2P70298 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cux2P70298 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Gm3945-201ENSMUST00000196637 683 ntBASIC18.31■□□□□ 0.52
Cux2P70298 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC18.31■□□□□ 0.52
Cux2P70298 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cux2P70298 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cux2P70298 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Cux2P70298 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cux2P70298 Gm43102-201ENSMUST00000201004 2324 ntBASIC18.3■□□□□ 0.52
Cux2P70298 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC18.3■□□□□ 0.52
Cux2P70298 Gm26379-201ENSMUST00000178125 138 ntBASIC18.3■□□□□ 0.52
Cux2P70298 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC18.3■□□□□ 0.52
Cux2P70298 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC18.3■□□□□ 0.52
Cux2P70298 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC18.3■□□□□ 0.52
Cux2P70298 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC18.3■□□□□ 0.52
Cux2P70298 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Cux2P70298 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cux2P70298 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Cux2P70298 Gm37058-201ENSMUST00000193393 1644 ntBASIC18.29■□□□□ 0.52
Cux2P70298 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Btrc-209ENSMUST00000224478 2194 ntBASIC18.29■□□□□ 0.52
Cux2P70298 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cux2P70298 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Cux2P70298 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cux2P70298 Gm9947-201ENSMUST00000067599 2920 ntBASIC18.29■□□□□ 0.52
Cux2P70298 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Gm43972-201ENSMUST00000181398 1467 ntBASIC18.29■□□□□ 0.52
Cux2P70298 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Klf10-203ENSMUST00000227920 2144 ntBASIC18.29■□□□□ 0.52
Cux2P70298 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cux2P70298 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cux2P70298 Snora68-201ENSMUST00000104375 131 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms