Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Traf6P70196 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.3□□□□□ -0.6
Traf6P70196 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Traf6P70196 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.3□□□□□ -0.6
Traf6P70196 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Traf6P70196 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Traf6P70196 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Traf6P70196 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Traf6P70196 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Traf6P70196 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.3□□□□□ -0.6
Traf6P70196 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Traf6P70196 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Traf6P70196 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Traf6P70196 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.3□□□□□ -0.6
Traf6P70196 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Traf6P70196 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.29□□□□□ -0.6
Traf6P70196 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Traf6P70196 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Traf6P70196 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Traf6P70196 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.29□□□□□ -0.6
Traf6P70196 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Traf6P70196 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.29□□□□□ -0.6
Traf6P70196 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Traf6P70196 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.29□□□□□ -0.6
Traf6P70196 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.29□□□□□ -0.6
Traf6P70196 Gm26361-201ENSMUST00000158868 186 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Gm8343-201ENSMUST00000182705 994 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Mir8093-201ENSMUST00000185043 137 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.29□□□□□ -0.6
Traf6P70196 Gm4157-201ENSMUST00000211647 679 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Gm18212-201ENSMUST00000211678 889 ntBASIC11.29□□□□□ -0.6
Traf6P70196 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.29□□□□□ -0.6
Traf6P70196 Gm7940-201ENSMUST00000218195 769 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.29□□□□□ -0.6
Traf6P70196 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Traf6P70196 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.29□□□□□ -0.6
Traf6P70196 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.29□□□□□ -0.6
Traf6P70196 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.29□□□□□ -0.6
Traf6P70196 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.29□□□□□ -0.6
Traf6P70196 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Traf6P70196 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Gm18719-201ENSMUST00000196696 1413 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.28□□□□□ -0.6
Traf6P70196 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms