Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.2□□□□□ -0.94
Lmo4P61969 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.2□□□□□ -0.94
Lmo4P61969 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.2□□□□□ -0.94
Lmo4P61969 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Lmo4P61969 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Lmo4P61969 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Lmo4P61969 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm12816-201ENSMUST00000118069 1212 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC9.19□□□□□ -0.94
Lmo4P61969 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm24809-201ENSMUST00000175318 271 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm37365-201ENSMUST00000193109 409 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm44216-201ENSMUST00000203942 157 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm3433-201ENSMUST00000210149 1058 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm6390-201ENSMUST00000215034 589 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 AC154361.2-201ENSMUST00000224747 943 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 AC130477.1-201ENSMUST00000226982 420 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Lmo4P61969 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Lmo4P61969 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Lmo4P61969 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.19□□□□□ -0.94
Lmo4P61969 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC9.19□□□□□ -0.94
Lmo4P61969 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Lmo4P61969 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.18□□□□□ -0.94
Lmo4P61969 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Lmo4P61969 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Lmo4P61969 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Lmo4P61969 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Snord17-201ENSMUST00000104526 238 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Snord23-201ENSMUST00000116828 109 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Gm4917-201ENSMUST00000121452 650 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Gm3828-201ENSMUST00000121817 257 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC9.18□□□□□ -0.94
Lmo4P61969 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.18□□□□□ -0.94
Lmo4P61969 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms