Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ctdsp1P58466 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ctdsp1P58466 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC8.83□□□□□ -1
Ctdsp1P58466 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC8.83□□□□□ -1
Ctdsp1P58466 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ctdsp1P58466 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC8.83□□□□□ -1
Ctdsp1P58466 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC8.83□□□□□ -1
Ctdsp1P58466 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Ctdsp1P58466 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC8.83□□□□□ -1
Ctdsp1P58466 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ctdsp1P58466 Gm29164-201ENSMUST00000185454 1024 ntBASIC8.83□□□□□ -1
Ctdsp1P58466 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC8.83□□□□□ -1
Ctdsp1P58466 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC8.83□□□□□ -1
Ctdsp1P58466 AC124732.2-201ENSMUST00000221977 316 ntBASIC8.83□□□□□ -1
Ctdsp1P58466 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC8.83□□□□□ -1
Ctdsp1P58466 AC069562.3-201ENSMUST00000225387 587 ntBASIC8.83□□□□□ -1
Ctdsp1P58466 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Ctdsp1P58466 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ctdsp1P58466 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Ctdsp1P58466 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 AA474408-201ENSMUST00000098110 3339 ntBASIC8.83□□□□□ -1
Ctdsp1P58466 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 Gm45132-201ENSMUST00000207234 2542 ntBASIC8.83□□□□□ -1
Ctdsp1P58466 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ctdsp1P58466 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ctdsp1P58466 AC154352.1-201ENSMUST00000221477 2365 ntBASIC8.83□□□□□ -1
Ctdsp1P58466 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC8.82□□□□□ -1
Ctdsp1P58466 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Ctdsp1P58466 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Gm7742-201ENSMUST00000167648 1527 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 Gm7732-201ENSMUST00000170486 1527 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 Gm7740-201ENSMUST00000186171 1527 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 Gm7736-201ENSMUST00000096981 1527 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ctdsp1P58466 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC8.82□□□□□ -1
Ctdsp1P58466 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Ctdsp1P58466 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC8.82□□□□□ -1
Ctdsp1P58466 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Gm6981-201ENSMUST00000182467 1008 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ctdsp1P58466 Gm31326-201ENSMUST00000191856 1048 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Gm5276-201ENSMUST00000196683 1047 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ctdsp1P58466 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ctdsp1P58466 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ctdsp1P58466 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Ctdsp1P58466 AC109214.1-201ENSMUST00000219520 1372 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms