Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Gm24992-201ENSMUST00000157412 130 ntBASIC12.04□□□□□ -0.48
Shmt1P50431 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.04□□□□□ -0.48
Shmt1P50431 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.04□□□□□ -0.48
Shmt1P50431 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.04□□□□□ -0.48
Shmt1P50431 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.04□□□□□ -0.48
Shmt1P50431 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.04□□□□□ -0.48
Shmt1P50431 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.04□□□□□ -0.48
Shmt1P50431 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.04□□□□□ -0.48
Shmt1P50431 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.04□□□□□ -0.48
Shmt1P50431 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.04□□□□□ -0.48
Shmt1P50431 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Shmt1P50431 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Shmt1P50431 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt1P50431 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.03□□□□□ -0.48
Shmt1P50431 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shmt1P50431 Gm12795-201ENSMUST00000117594 539 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Gm16219-201ENSMUST00000120096 274 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Gm13182-201ENSMUST00000122241 312 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Shmt1P50431 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.03□□□□□ -0.48
Shmt1P50431 Mir1956-201ENSMUST00000157748 65 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Gm25072-201ENSMUST00000175233 235 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Gm23153-201ENSMUST00000175323 313 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Mir7051-201ENSMUST00000184167 73 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Mir6958-201ENSMUST00000184207 73 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Gm28324-201ENSMUST00000187913 264 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Gm44158-201ENSMUST00000203881 505 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shmt1P50431 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Shmt1P50431 Gm8420-201ENSMUST00000097103 598 ntBASIC12.03□□□□□ -0.48
Shmt1P50431 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shmt1P50431 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Shmt1P50431 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Shmt1P50431 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt1P50431 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Shmt1P50431 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shmt1P50431 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.02□□□□□ -0.48
Shmt1P50431 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Shmt1P50431 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Shmt1P50431 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.02□□□□□ -0.48
Shmt1P50431 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shmt1P50431 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shmt1P50431 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Shmt1P50431 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.02□□□□□ -0.49
Shmt1P50431 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms