Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Timp3P39876 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Timp3P39876 Gm8731-201ENSMUST00000118088 412 ntBASIC9.4□□□□□ -0.9
Timp3P39876 Gm11956-201ENSMUST00000119525 512 ntBASIC9.4□□□□□ -0.9
Timp3P39876 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.4□□□□□ -0.9
Timp3P39876 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Timp3P39876 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.4□□□□□ -0.9
Timp3P39876 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.4□□□□□ -0.9
Timp3P39876 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Gm44506-201ENSMUST00000206278 965 ntBASIC9.4□□□□□ -0.9
Timp3P39876 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.4□□□□□ -0.9
Timp3P39876 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.4□□□□□ -0.9
Timp3P39876 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.4□□□□□ -0.9
Timp3P39876 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Timp3P39876 CT030637.1-201ENSMUST00000228016 669 ntBASIC9.4□□□□□ -0.9
Timp3P39876 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.4□□□□□ -0.9
Timp3P39876 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Timp3P39876 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Timp3P39876 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.4□□□□□ -0.9
Timp3P39876 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Timp3P39876 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Timp3P39876 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Timp3P39876 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.4□□□□□ -0.91
Timp3P39876 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Timp3P39876 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.4□□□□□ -0.91
Timp3P39876 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Timp3P39876 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Timp3P39876 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Timp3P39876 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Timp3P39876 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.91
Timp3P39876 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Timp3P39876 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Timp3P39876 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Timp3P39876 Gm12579-201ENSMUST00000118040 783 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.39□□□□□ -0.91
Timp3P39876 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Gm21092-201ENSMUST00000178995 955 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Gm27438-201ENSMUST00000183480 110 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Mir7032-201ENSMUST00000185154 79 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.39□□□□□ -0.91
Timp3P39876 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Gm9463-201ENSMUST00000206707 601 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Gm8285-201ENSMUST00000208293 759 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Timp3P39876 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Timp3P39876 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Timp3P39876 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.39□□□□□ -0.91
Timp3P39876 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Timp3P39876 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.39□□□□□ -0.91
Timp3P39876 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.39□□□□□ -0.91
Timp3P39876 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Timp3P39876 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms