Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sftpa1P35242 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sftpa1P35242 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.55□□□□□ -0.72
Sftpa1P35242 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Pck2-205ENSMUST00000226352 2784 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sftpa1P35242 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
Sftpa1P35242 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm25148-201ENSMUST00000104611 123 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm9166-201ENSMUST00000120293 561 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.54□□□□□ -0.72
Sftpa1P35242 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm11993-201ENSMUST00000121861 820 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.54□□□□□ -0.72
Sftpa1P35242 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.54□□□□□ -0.72
Sftpa1P35242 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm6606-201ENSMUST00000193613 947 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm42660-201ENSMUST00000197733 947 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm9204-201ENSMUST00000212641 947 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sftpa1P35242 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sftpa1P35242 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sftpa1P35242 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.54□□□□□ -0.72
Sftpa1P35242 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.54□□□□□ -0.72
Sftpa1P35242 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sftpa1P35242 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.53□□□□□ -0.72
Sftpa1P35242 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sftpa1P35242 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sftpa1P35242 Gm12337-201ENSMUST00000119634 400 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 Gm13284-201ENSMUST00000121020 547 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 Gm25343-201ENSMUST00000157460 107 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.53□□□□□ -0.72
Sftpa1P35242 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.53□□□□□ -0.72
Sftpa1P35242 Gm29067-201ENSMUST00000190821 470 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sftpa1P35242 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 Gm30946-201ENSMUST00000198288 724 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Sftpa1P35242 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 Gm45094-201ENSMUST00000207013 617 ntBASIC10.53□□□□□ -0.72
Sftpa1P35242 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 233.2 ms