Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm29410-201ENSMUST00000188383 694 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm18561-201ENSMUST00000206027 804 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.75□□□□□ -0.53
Nfkb1P25799 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm9139-201ENSMUST00000218817 700 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.75□□□□□ -0.53
Nfkb1P25799 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.74□□□□□ -0.53
Nfkb1P25799 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm13422-201ENSMUST00000118834 504 ntBASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.74□□□□□ -0.53
Nfkb1P25799 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm22442-201ENSMUST00000157256 144 ntBASIC11.74□□□□□ -0.53
Nfkb1P25799 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm23694-201ENSMUST00000179335 110 ntBASIC11.74□□□□□ -0.53
Nfkb1P25799 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.74□□□□□ -0.53
Nfkb1P25799 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Nfkb1P25799 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm10263-201ENSMUST00000085163 300 ntBASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.74□□□□□ -0.53
Nfkb1P25799 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.74□□□□□ -0.53
Nfkb1P25799 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nfkb1P25799 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm25063-201ENSMUST00000104666 94 ntBASIC11.73□□□□□ -0.53
Nfkb1P25799 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm11628-201ENSMUST00000117568 171 ntBASIC11.73□□□□□ -0.53
Nfkb1P25799 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms