Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Hoxa3P02831 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm6114-201ENSMUST00000182472 968 ntBASIC9.6□□□□□ -0.87
Hoxa3P02831 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.6□□□□□ -0.87
Hoxa3P02831 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.6□□□□□ -0.87
Hoxa3P02831 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Hoxa3P02831 BC043934-202ENSMUST00000185694 2356 ntBASIC9.6□□□□□ -0.87
Hoxa3P02831 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.6□□□□□ -0.87
Hoxa3P02831 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.6□□□□□ -0.87
Hoxa3P02831 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Hoxa3P02831 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxa3P02831 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm25076-201ENSMUST00000104098 132 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.59□□□□□ -0.87
Hoxa3P02831 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Mir7076-201ENSMUST00000183519 74 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC9.59□□□□□ -0.87
Hoxa3P02831 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm5982-201ENSMUST00000196234 512 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm44329-201ENSMUST00000197469 112 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm6108-201ENSMUST00000208365 367 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Olfr584-201ENSMUST00000098210 964 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Hoxa3P02831 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Hoxa3P02831 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.59□□□□□ -0.87
Hoxa3P02831 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.59□□□□□ -0.87
Hoxa3P02831 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxa3P02831 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Hoxa3P02831 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms