Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ChkaO54804 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.52□□□□□ -0.56
ChkaO54804 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ChkaO54804 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ChkaO54804 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.52□□□□□ -0.56
ChkaO54804 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.52□□□□□ -0.56
ChkaO54804 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ChkaO54804 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.52□□□□□ -0.56
ChkaO54804 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ChkaO54804 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
ChkaO54804 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.52□□□□□ -0.56
ChkaO54804 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ChkaO54804 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ChkaO54804 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.52□□□□□ -0.57
ChkaO54804 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.52□□□□□ -0.57
ChkaO54804 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
ChkaO54804 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Gm14724-201ENSMUST00000118400 537 ntBASIC11.52□□□□□ -0.57
ChkaO54804 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.52□□□□□ -0.57
ChkaO54804 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.52□□□□□ -0.57
ChkaO54804 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.52□□□□□ -0.57
ChkaO54804 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.52□□□□□ -0.57
ChkaO54804 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.52□□□□□ -0.57
ChkaO54804 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Gm6722-201ENSMUST00000221586 390 ntBASIC11.52□□□□□ -0.57
ChkaO54804 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.52□□□□□ -0.57
ChkaO54804 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
ChkaO54804 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.52□□□□□ -0.57
ChkaO54804 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
ChkaO54804 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ChkaO54804 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ChkaO54804 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.51□□□□□ -0.57
ChkaO54804 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ChkaO54804 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ChkaO54804 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ChkaO54804 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.51□□□□□ -0.57
ChkaO54804 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
ChkaO54804 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.51□□□□□ -0.57
ChkaO54804 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
ChkaO54804 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.51□□□□□ -0.57
ChkaO54804 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.51□□□□□ -0.57
ChkaO54804 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.51□□□□□ -0.57
ChkaO54804 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.51□□□□□ -0.57
ChkaO54804 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.51□□□□□ -0.57
ChkaO54804 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.51□□□□□ -0.57
ChkaO54804 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ChkaO54804 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.51□□□□□ -0.57
ChkaO54804 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
ChkaO54804 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
ChkaO54804 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.51□□□□□ -0.57
ChkaO54804 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
ChkaO54804 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ChkaO54804 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ChkaO54804 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ChkaO54804 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
ChkaO54804 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms