Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npc1O35604 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Npc1O35604 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npc1O35604 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npc1O35604 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npc1O35604 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Npc1O35604 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Npc1O35604 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Npc1O35604 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.14□□□□□ -0.63
Npc1O35604 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.14□□□□□ -0.63
Npc1O35604 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Npc1O35604 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Npc1O35604 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Npc1O35604 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.14□□□□□ -0.63
Npc1O35604 Gm14460-201ENSMUST00000121511 639 ntBASIC11.14□□□□□ -0.63
Npc1O35604 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.14□□□□□ -0.63
Npc1O35604 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.14□□□□□ -0.63
Npc1O35604 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Npc1O35604 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Npc1O35604 Gm7741-201ENSMUST00000181445 989 ntBASIC11.14□□□□□ -0.63
Npc1O35604 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Npc1O35604 Gm37981-201ENSMUST00000194280 535 ntBASIC11.14□□□□□ -0.63
Npc1O35604 Gm9645-201ENSMUST00000197131 792 ntBASIC11.14□□□□□ -0.63
Npc1O35604 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Npc1O35604 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Npc1O35604 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Npc1O35604 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Npc1O35604 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Npc1O35604 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.13□□□□□ -0.63
Npc1O35604 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Npc1O35604 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Npc1O35604 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Npc1O35604 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Gm12247-201ENSMUST00000117585 670 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Gm15615-201ENSMUST00000118876 198 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.13□□□□□ -0.63
Npc1O35604 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Mir3547-201ENSMUST00000175461 88 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Npc1O35604 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Npc1O35604 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Npc1O35604 Gm44980-201ENSMUST00000205826 314 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Gm9463-201ENSMUST00000206707 601 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.13□□□□□ -0.63
Npc1O35604 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.13□□□□□ -0.63
Npc1O35604 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Gm29787-201ENSMUST00000222129 849 ntBASIC11.13□□□□□ -0.63
Npc1O35604 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.13□□□□□ -0.63
Npc1O35604 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Npc1O35604 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Npc1O35604 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms