Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.21□□□□□ -0.61
Slc1a6O35544 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Slc1a6O35544 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.21□□□□□ -0.61
Slc1a6O35544 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.21□□□□□ -0.61
Slc1a6O35544 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.21□□□□□ -0.61
Slc1a6O35544 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Slc1a6O35544 Gm18054-201ENSMUST00000207539 555 ntBASIC11.21□□□□□ -0.61
Slc1a6O35544 Gm21769-201ENSMUST00000211922 111 ntBASIC11.21□□□□□ -0.61
Slc1a6O35544 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc1a6O35544 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Slc1a6O35544 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Slc1a6O35544 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Slc1a6O35544 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Slc1a6O35544 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Slc1a6O35544 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Slc1a6O35544 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Slc1a6O35544 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Slc1a6O35544 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.21□□□□□ -0.62
Slc1a6O35544 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Slc1a6O35544 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Slc1a6O35544 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Gm15207-201ENSMUST00000119259 442 ntBASIC11.2□□□□□ -0.62
Slc1a6O35544 Gm11783-201ENSMUST00000119549 885 ntBASIC11.2□□□□□ -0.62
Slc1a6O35544 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.2□□□□□ -0.62
Slc1a6O35544 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.2□□□□□ -0.62
Slc1a6O35544 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.2□□□□□ -0.62
Slc1a6O35544 Gm43433-201ENSMUST00000196573 481 ntBASIC11.2□□□□□ -0.62
Slc1a6O35544 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Gm18935-201ENSMUST00000212692 664 ntBASIC11.2□□□□□ -0.62
Slc1a6O35544 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.2□□□□□ -0.62
Slc1a6O35544 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Slc1a6O35544 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Slc1a6O35544 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Slc1a6O35544 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
Slc1a6O35544 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.19□□□□□ -0.62
Slc1a6O35544 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc1a6O35544 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc1a6O35544 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc1a6O35544 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc1a6O35544 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc1a6O35544 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc1a6O35544 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Slc1a6O35544 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Slc1a6O35544 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms