Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Gm44651-201ENSMUST00000207343 372 ntBASIC10.18□□□□□ -0.78
Alx4O35137 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.18□□□□□ -0.78
Alx4O35137 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Alx4O35137 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Alx4O35137 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
Alx4O35137 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Alx4O35137 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.18□□□□□ -0.78
Alx4O35137 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Alx4O35137 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Alx4O35137 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.17□□□□□ -0.78
Alx4O35137 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Alx4O35137 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Alx4O35137 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Alx4O35137 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Alx4O35137 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Alx4O35137 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Alx4O35137 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Alx4O35137 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Alx4O35137 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.17□□□□□ -0.78
Alx4O35137 Gm12957-201ENSMUST00000117835 377 ntBASIC10.17□□□□□ -0.78
Alx4O35137 Gm12241-201ENSMUST00000118330 726 ntBASIC10.17□□□□□ -0.78
Alx4O35137 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.17□□□□□ -0.78
Alx4O35137 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.17□□□□□ -0.78
Alx4O35137 AY702102-202ENSMUST00000194651 1173 ntBASIC10.17□□□□□ -0.78
Alx4O35137 Gm37301-201ENSMUST00000195412 568 ntBASIC10.17□□□□□ -0.78
Alx4O35137 Gm43184-201ENSMUST00000197247 542 ntBASIC10.17□□□□□ -0.78
Alx4O35137 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.17□□□□□ -0.78
Alx4O35137 Gm17827-201ENSMUST00000211825 742 ntBASIC10.17□□□□□ -0.78
Alx4O35137 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Gm4978-201ENSMUST00000071565 801 ntBASIC10.17□□□□□ -0.78
Alx4O35137 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Alx4O35137 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Alx4O35137 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.17□□□□□ -0.78
Alx4O35137 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Alx4O35137 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Alx4O35137 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Alx4O35137 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Alx4O35137 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Alx4O35137 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Alx4O35137 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Alx4O35137 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Alx4O35137 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Alx4O35137 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Alx4O35137 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Alx4O35137 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Alx4O35137 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Alx4O35137 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Alx4O35137 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Alx4O35137 Gm13296-201ENSMUST00000117854 997 ntBASIC10.16□□□□□ -0.78
Alx4O35137 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms