Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm25226-201ENSMUST00000158198 123 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm23694-201ENSMUST00000179335 110 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm2345-201ENSMUST00000193451 589 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 Mir7051-201ENSMUST00000184167 73 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm6331-201ENSMUST00000217890 450 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.24□□□□□ -0.77
Shank1D3YZU1 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.23□□□□□ -0.77
Shank1D3YZU1 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.23□□□□□ -0.77
Shank1D3YZU1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Gm14234-201ENSMUST00000119539 845 ntBASIC10.23□□□□□ -0.77
Shank1D3YZU1 Gm12337-201ENSMUST00000119634 400 ntBASIC10.23□□□□□ -0.77
Shank1D3YZU1 Gm15197-201ENSMUST00000120526 478 ntBASIC10.23□□□□□ -0.77
Shank1D3YZU1 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Mir6973a-201ENSMUST00000183646 78 ntBASIC10.23□□□□□ -0.77
Shank1D3YZU1 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.23□□□□□ -0.77
Shank1D3YZU1 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Shank1D3YZU1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
Shank1D3YZU1 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Shank1D3YZU1 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Shank1D3YZU1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.22□□□□□ -0.77
Shank1D3YZU1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Shank1D3YZU1 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms