Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Gm11793-201ENSMUST00000120433 981 ntBASIC12.64□□□□□ -0.39
Brpf3B2KF05 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.64□□□□□ -0.39
Brpf3B2KF05 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.64□□□□□ -0.39
Brpf3B2KF05 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.64□□□□□ -0.39
Brpf3B2KF05 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.64□□□□□ -0.39
Brpf3B2KF05 Gm43962-201ENSMUST00000203898 190 ntBASIC12.64□□□□□ -0.39
Brpf3B2KF05 Gm19309-201ENSMUST00000218295 205 ntBASIC12.64□□□□□ -0.39
Brpf3B2KF05 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brpf3B2KF05 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.63□□□□□ -0.39
Brpf3B2KF05 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.63□□□□□ -0.39
Brpf3B2KF05 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm30285-201ENSMUST00000214614 422 ntBASIC12.63□□□□□ -0.39
Brpf3B2KF05 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.63□□□□□ -0.39
Brpf3B2KF05 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Brpf3B2KF05 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.62□□□□□ -0.39
Brpf3B2KF05 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Gm7150-201ENSMUST00000122032 981 ntBASIC12.62□□□□□ -0.39
Brpf3B2KF05 Gm15547-201ENSMUST00000122152 333 ntBASIC12.62□□□□□ -0.39
Brpf3B2KF05 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.62□□□□□ -0.39
Brpf3B2KF05 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.62□□□□□ -0.39
Brpf3B2KF05 Gm45598-202ENSMUST00000210719 986 ntBASIC12.62□□□□□ -0.39
Brpf3B2KF05 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms