Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Defa-ps17-201ENSMUST00000121849 171 ntBASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Gm16228-201ENSMUST00000162286 809 ntBASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.52□□□□□ -0.57
Col4a6B1AVK5 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Gm25514-201ENSMUST00000083860 135 ntBASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Col4a6B1AVK5 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Gm6238-201ENSMUST00000120999 465 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Gm3527-201ENSMUST00000198905 460 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col4a6B1AVK5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm5510-201ENSMUST00000117826 486 ntBASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm15636-201ENSMUST00000119205 668 ntBASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm12950-201ENSMUST00000121683 417 ntBASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm4943-201ENSMUST00000132879 424 ntBASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm43811-201ENSMUST00000202862 695 ntBASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms