Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm5996-201ENSMUST00000211110 718 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm45856-201ENSMUST00000212752 416 ntBASIC11.4□□□□□ -0.58
H2afb2S4R1M3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb2S4R1M3 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.4□□□□□ -0.59
H2afb2S4R1M3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afb2S4R1M3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afb2S4R1M3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.4□□□□□ -0.59
H2afb2S4R1M3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm22920-201ENSMUST00000102175 109 ntBASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm4909-201ENSMUST00000118749 794 ntBASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm25732-201ENSMUST00000175168 60 ntBASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb2S4R1M3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm15329-201ENSMUST00000121408 155 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm15549-201ENSMUST00000121595 622 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms