Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Gm15595-201ENSMUST00000120840 961 ntBASIC12.04□□□□□ -0.48
Nup50Q9JIH2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Gm5733-201ENSMUST00000190232 939 ntBASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Gm43438-201ENSMUST00000198133 379 ntBASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.04□□□□□ -0.48
Nup50Q9JIH2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.03□□□□□ -0.48
Nup50Q9JIH2 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Gm12501-201ENSMUST00000119163 529 ntBASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.03□□□□□ -0.48
Nup50Q9JIH2 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup50Q9JIH2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup50Q9JIH2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup50Q9JIH2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup50Q9JIH2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup50Q9JIH2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.02□□□□□ -0.49
Nup50Q9JIH2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nup50Q9JIH2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Nup50Q9JIH2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup50Q9JIH2 Gm12247-201ENSMUST00000117585 670 ntBASIC12.02□□□□□ -0.49
Nup50Q9JIH2 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.02□□□□□ -0.49
Nup50Q9JIH2 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.02□□□□□ -0.49
Nup50Q9JIH2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms