Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Gm14724-201ENSMUST00000118400 537 ntBASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Gm15881-201ENSMUST00000148792 942 ntBASIC12.83□□□□□ -0.36
Smc1aQ9CU62 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Gm10774-201ENSMUST00000188689 204 ntBASIC12.83□□□□□ -0.36
Smc1aQ9CU62 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Gm43058-201ENSMUST00000197645 625 ntBASIC12.83□□□□□ -0.36
Smc1aQ9CU62 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.83□□□□□ -0.36
Smc1aQ9CU62 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Smc1aQ9CU62 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm12857-201ENSMUST00000117678 592 ntBASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm8194-201ENSMUST00000159783 859 ntBASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm8365-201ENSMUST00000197334 648 ntBASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Mir7686-201ENSMUST00000200604 57 ntBASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.82□□□□□ -0.36
Smc1aQ9CU62 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smc1aQ9CU62 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smc1aQ9CU62 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms