Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm4294-201ENSMUST00000105169 614 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm7666-201ENSMUST00000146631 819 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm42867-201ENSMUST00000202995 469 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm17825-201ENSMUST00000206836 794 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm2517-201ENSMUST00000215651 348 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb1Q91Y08 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm15374-201ENSMUST00000119313 844 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm11244-201ENSMUST00000121243 237 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm43852-201ENSMUST00000202098 917 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms