Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Mir1190-201ENSMUST00000116925 96 ntBASIC13.24□□□□□ -0.29
StrcQ8VIM6 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.24□□□□□ -0.29
StrcQ8VIM6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.24□□□□□ -0.29
StrcQ8VIM6 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm7781-201ENSMUST00000117258 788 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm21963-201ENSMUST00000179519 330 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm18122-201ENSMUST00000211390 904 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm42833-201ENSMUST00000196019 2124 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm6713-201ENSMUST00000216137 1446 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Mir7088-201ENSMUST00000184227 86 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm28179-201ENSMUST00000188365 613 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm19058-201ENSMUST00000192135 598 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
StrcQ8VIM6 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.23□□□□□ -0.29
StrcQ8VIM6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC13.22□□□□□ -0.29
StrcQ8VIM6 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.22□□□□□ -0.29
StrcQ8VIM6 Gm26379-201ENSMUST00000178125 138 ntBASIC13.22□□□□□ -0.29
StrcQ8VIM6 Gm28032-201ENSMUST00000184104 96 ntBASIC13.22□□□□□ -0.29
StrcQ8VIM6 AC164883.7-201ENSMUST00000228534 851 ntBASIC13.22□□□□□ -0.29
StrcQ8VIM6 Gm5292-201ENSMUST00000073317 580 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms