Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Usp44Q8C2S0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Mir7051-201ENSMUST00000184167 73 ntBASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Gm43520-201ENSMUST00000197996 164 ntBASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Gm9132-201ENSMUST00000210182 832 ntBASIC13.32□□□□□ -0.28
Usp44Q8C2S0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.32□□□□□ -0.28
Usp44Q8C2S0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp44Q8C2S0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.31□□□□□ -0.28
Usp44Q8C2S0 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp44Q8C2S0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms