Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Gm8343-201ENSMUST00000182705 994 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Gm38341-201ENSMUST00000195357 515 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Gm38317-201ENSMUST00000195564 343 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Gm17812-201ENSMUST00000204935 318 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm24255-201ENSMUST00000104481 128 ntBASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm28686-201ENSMUST00000187404 609 ntBASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm43184-201ENSMUST00000197247 542 ntBASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp2bQ8BJF9 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms