Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim62Q80V85 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim62Q80V85 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim62Q80V85 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.83□□□□□ -0.52
Trim62Q80V85 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim62Q80V85 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim62Q80V85 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim62Q80V85 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim62Q80V85 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.83□□□□□ -0.52
Trim62Q80V85 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim62Q80V85 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim62Q80V85 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim62Q80V85 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim62Q80V85 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim62Q80V85 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Btrc-209ENSMUST00000224478 2194 ntBASIC11.82□□□□□ -0.52
Trim62Q80V85 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.82□□□□□ -0.52
Trim62Q80V85 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm14395-201ENSMUST00000120494 563 ntBASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.82□□□□□ -0.52
Trim62Q80V85 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.82□□□□□ -0.52
Trim62Q80V85 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim62Q80V85 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim62Q80V85 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm25076-201ENSMUST00000104098 132 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm12463-201ENSMUST00000118271 849 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm15374-201ENSMUST00000119313 844 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trim62Q80V85 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm5468-202ENSMUST00000227851 682 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim62Q80V85 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim62Q80V85 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim62Q80V85 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.81□□□□□ -0.52
Trim62Q80V85 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms