Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gm22920-201ENSMUST00000102175 109 ntBASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gm14942-201ENSMUST00000119642 336 ntBASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gm17214-201ENSMUST00000164501 541 ntBASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gm4654-201ENSMUST00000183305 982 ntBASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Prpf38bQ80SY5 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm26286-201ENSMUST00000104166 134 ntBASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm11893-201ENSMUST00000117829 491 ntBASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm11511-201ENSMUST00000118146 540 ntBASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm10731-201ENSMUST00000181171 448 ntBASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Prpf38bQ80SY5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Prpf38bQ80SY5 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms