Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gm12912-201ENSMUST00000121596 1381 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gm12136-201ENSMUST00000120460 1209 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gm6352-201ENSMUST00000203583 1134 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gm45258-201ENSMUST00000210042 853 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gm18042-201ENSMUST00000219887 790 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 BX649293.1-201ENSMUST00000227437 631 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gm10580-201ENSMUST00000097985 396 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gm10582-201ENSMUST00000097987 396 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Gm10583-201ENSMUST00000097988 396 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 AC149588.2-201ENSMUST00000228182 1859 ntBASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup98Q6PFD9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 BC106175-202ENSMUST00000219344 1213 ntBASIC13.23□□□□□ -0.29
Nup98Q6PFD9 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.23□□□□□ -0.29
Nup98Q6PFD9 CT025679.1-201ENSMUST00000227106 449 ntBASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gm14113-201ENSMUST00000121399 976 ntBASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gm13981-201ENSMUST00000122360 447 ntBASIC13.23□□□□□ -0.29
Nup98Q6PFD9 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gm7047-201ENSMUST00000196224 1063 ntBASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup98Q6PFD9 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.23□□□□□ -0.29
Nup98Q6PFD9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Gm7405-201ENSMUST00000121476 1337 ntBASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms