Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm12616-201ENSMUST00000118594 382 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm15573-201ENSMUST00000119487 540 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm7666-201ENSMUST00000146631 819 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm22334-201ENSMUST00000158070 133 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm9550-201ENSMUST00000161130 862 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm12624-201ENSMUST00000177615 382 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm12621-201ENSMUST00000177760 382 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm12615-201ENSMUST00000177970 382 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm12622-201ENSMUST00000177975 382 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm12627-201ENSMUST00000178412 382 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm12625-201ENSMUST00000179122 382 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm12614-201ENSMUST00000179586 382 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm12613-201ENSMUST00000180323 382 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Mir6546-201ENSMUST00000184460 62 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc2Q6PDG5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Gm11956-201ENSMUST00000119525 512 ntBASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Gm5523-201ENSMUST00000180415 997 ntBASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms