Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm8459-201ENSMUST00000162504 760 ntBASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm4482-201ENSMUST00000200876 742 ntBASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm9257-201ENSMUST00000221254 232 ntBASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm23200-201ENSMUST00000104379 132 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm7150-201ENSMUST00000122032 981 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm10807-201ENSMUST00000177134 795 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 AU022133-201ENSMUST00000200601 873 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm44008-201ENSMUST00000204345 412 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav5d-4Q5R1F6 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms