Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm12176-201ENSMUST00000121420 875 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Olfml3-204ENSMUST00000169286 874 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm21778-201ENSMUST00000178779 471 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm3551-201ENSMUST00000190750 664 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm37905-201ENSMUST00000195310 341 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm43520-201ENSMUST00000197996 164 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nlrc4Q3UP24 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm8111-201ENSMUST00000117659 987 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm12616-201ENSMUST00000118594 382 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm14395-201ENSMUST00000120494 563 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm6485-201ENSMUST00000160676 439 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm19459-201ENSMUST00000176240 835 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm12624-201ENSMUST00000177615 382 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm12621-201ENSMUST00000177760 382 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm12615-201ENSMUST00000177970 382 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm12622-201ENSMUST00000177975 382 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm12627-201ENSMUST00000178412 382 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm23771-201ENSMUST00000178702 110 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm12625-201ENSMUST00000179122 382 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm12614-201ENSMUST00000179586 382 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm12613-201ENSMUST00000180323 382 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm9645-201ENSMUST00000197131 792 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm44126-201ENSMUST00000204831 514 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Snora73b-201ENSMUST00000083419 205 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms