Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col9a2Q07643 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm11801-201ENSMUST00000117807 746 ntBASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm14270-201ENSMUST00000118388 846 ntBASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.35□□□□□ -0.43
Col9a2Q07643 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm9081-201ENSMUST00000182346 991 ntBASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.35□□□□□ -0.43
Col9a2Q07643 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.35□□□□□ -0.43
Col9a2Q07643 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col9a2Q07643 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.35□□□□□ -0.43
Col9a2Q07643 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Col9a2Q07643 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Col9a2Q07643 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col9a2Q07643 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col9a2Q07643 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm14807-201ENSMUST00000116640 983 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Snord23-201ENSMUST00000116828 109 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.34□□□□□ -0.43
Col9a2Q07643 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm19587-201ENSMUST00000191395 545 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm5805-201ENSMUST00000072779 456 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col9a2Q07643 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Col9a2Q07643 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Col9a2Q07643 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col9a2Q07643 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Col9a2Q07643 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.33□□□□□ -0.44
Col9a2Q07643 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.33□□□□□ -0.44
Col9a2Q07643 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col9a2Q07643 Gm9673-201ENSMUST00000119287 781 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 Gm14213-201ENSMUST00000119778 768 ntBASIC12.33□□□□□ -0.44
Col9a2Q07643 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms