Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Gm3329-201ENSMUST00000159873 556 ntBASIC11.5□□□□□ -0.57
Pfdn6Q03958 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Gm10807-201ENSMUST00000177134 795 ntBASIC11.5□□□□□ -0.57
Pfdn6Q03958 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.5□□□□□ -0.57
Pfdn6Q03958 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn6Q03958 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm2260-201ENSMUST00000184965 657 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm29499-201ENSMUST00000189151 486 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm28329-201ENSMUST00000191208 689 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm29171-201ENSMUST00000191397 486 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm4482-201ENSMUST00000200876 742 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm45113-201ENSMUST00000207518 165 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm4978-201ENSMUST00000071565 801 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.49□□□□□ -0.57
Pfdn6Q03958 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Pfdn6Q03958 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm13916-201ENSMUST00000117368 628 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm15808-201ENSMUST00000119046 604 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms