Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.94□□□□□ -0.34
GabpaQ00422 Gm7525-201ENSMUST00000219425 454 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
GabpaQ00422 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.94□□□□□ -0.34
GabpaQ00422 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GabpaQ00422 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
GabpaQ00422 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GabpaQ00422 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
GabpaQ00422 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
GabpaQ00422 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Gm11560-201ENSMUST00000117567 948 ntBASIC12.93□□□□□ -0.34
GabpaQ00422 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.93□□□□□ -0.34
GabpaQ00422 Gm13022-201ENSMUST00000121181 285 ntBASIC12.93□□□□□ -0.34
GabpaQ00422 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GabpaQ00422 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.93□□□□□ -0.34
GabpaQ00422 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.93□□□□□ -0.34
GabpaQ00422 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.93□□□□□ -0.34
GabpaQ00422 Gm35713-201ENSMUST00000210516 199 ntBASIC12.93□□□□□ -0.34
GabpaQ00422 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
GabpaQ00422 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
GabpaQ00422 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.93□□□□□ -0.34
GabpaQ00422 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
GabpaQ00422 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
GabpaQ00422 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GabpaQ00422 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.92□□□□□ -0.34
GabpaQ00422 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.92□□□□□ -0.34
GabpaQ00422 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.92□□□□□ -0.34
GabpaQ00422 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.92□□□□□ -0.34
GabpaQ00422 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.92□□□□□ -0.34
GabpaQ00422 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Gm11980-201ENSMUST00000121445 986 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Gm16030-201ENSMUST00000159098 603 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Gm43002-201ENSMUST00000200310 155 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Gm43671-201ENSMUST00000200422 433 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.92□□□□□ -0.34
GabpaQ00422 Gm43912-201ENSMUST00000204352 538 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.92□□□□□ -0.34
GabpaQ00422 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
GabpaQ00422 Id2-203ENSMUST00000222667 958 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
GabpaQ00422 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.92□□□□□ -0.34
GabpaQ00422 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
GabpaQ00422 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GabpaQ00422 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms