Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.26□□□□□ -0.77
SgcbP82349 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SgcbP82349 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.26□□□□□ -0.77
SgcbP82349 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SgcbP82349 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SgcbP82349 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SgcbP82349 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SgcbP82349 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SgcbP82349 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SgcbP82349 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SgcbP82349 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SgcbP82349 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SgcbP82349 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SgcbP82349 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SgcbP82349 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
SgcbP82349 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
SgcbP82349 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SgcbP82349 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SgcbP82349 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Gm8737-201ENSMUST00000122208 642 ntBASIC10.25□□□□□ -0.77
SgcbP82349 Mir1943-201ENSMUST00000158276 73 ntBASIC10.25□□□□□ -0.77
SgcbP82349 Gm23045-201ENSMUST00000175041 96 ntBASIC10.25□□□□□ -0.77
SgcbP82349 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Gm7741-201ENSMUST00000181445 989 ntBASIC10.25□□□□□ -0.77
SgcbP82349 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SgcbP82349 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.25□□□□□ -0.77
SgcbP82349 Gm3786-201ENSMUST00000202659 378 ntBASIC10.25□□□□□ -0.77
SgcbP82349 Gm45276-201ENSMUST00000209549 1086 ntBASIC10.25□□□□□ -0.77
SgcbP82349 Gm8342-201ENSMUST00000209839 757 ntBASIC10.25□□□□□ -0.77
SgcbP82349 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Gm2517-201ENSMUST00000215651 348 ntBASIC10.25□□□□□ -0.77
SgcbP82349 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.25□□□□□ -0.77
SgcbP82349 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.25□□□□□ -0.77
SgcbP82349 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SgcbP82349 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.25□□□□□ -0.77
SgcbP82349 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.25□□□□□ -0.77
SgcbP82349 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.25□□□□□ -0.77
SgcbP82349 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.25□□□□□ -0.77
SgcbP82349 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcbP82349 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SgcbP82349 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
SgcbP82349 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SgcbP82349 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.24□□□□□ -0.77
SgcbP82349 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
SgcbP82349 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC10.24□□□□□ -0.77
SgcbP82349 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
SgcbP82349 Gm12247-201ENSMUST00000117585 670 ntBASIC10.24□□□□□ -0.77
SgcbP82349 Gm14071-201ENSMUST00000117817 509 ntBASIC10.24□□□□□ -0.77
SgcbP82349 Gm14263-201ENSMUST00000117955 746 ntBASIC10.24□□□□□ -0.77
SgcbP82349 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.24□□□□□ -0.77
SgcbP82349 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.24□□□□□ -0.77
SgcbP82349 Gm8459-201ENSMUST00000162504 760 ntBASIC10.24□□□□□ -0.77
SgcbP82349 Gm4654-201ENSMUST00000183305 982 ntBASIC10.24□□□□□ -0.77
SgcbP82349 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.24□□□□□ -0.77
SgcbP82349 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.24□□□□□ -0.77
SgcbP82349 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.24□□□□□ -0.77
SgcbP82349 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.24□□□□□ -0.77
SgcbP82349 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.24□□□□□ -0.77
SgcbP82349 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.24□□□□□ -0.77
SgcbP82349 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.24□□□□□ -0.77
SgcbP82349 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms