Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.37□□□□□ -0.43
CiitaP79621 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.37□□□□□ -0.43
CiitaP79621 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.37□□□□□ -0.43
CiitaP79621 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CiitaP79621 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CiitaP79621 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.37□□□□□ -0.43
CiitaP79621 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.37□□□□□ -0.43
CiitaP79621 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.37□□□□□ -0.43
CiitaP79621 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CiitaP79621 Gm19246-201ENSMUST00000173599 255 ntBASIC12.37□□□□□ -0.43
CiitaP79621 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CiitaP79621 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CiitaP79621 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CiitaP79621 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CiitaP79621 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.37□□□□□ -0.43
CiitaP79621 Gm38210-201ENSMUST00000191944 809 ntBASIC12.37□□□□□ -0.43
CiitaP79621 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.37□□□□□ -0.43
CiitaP79621 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.37□□□□□ -0.43
CiitaP79621 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.37□□□□□ -0.43
CiitaP79621 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CiitaP79621 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CiitaP79621 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.37□□□□□ -0.43
CiitaP79621 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.37□□□□□ -0.43
CiitaP79621 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.37□□□□□ -0.43
CiitaP79621 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CiitaP79621 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.37□□□□□ -0.43
CiitaP79621 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CiitaP79621 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
CiitaP79621 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
CiitaP79621 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CiitaP79621 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.36□□□□□ -0.43
CiitaP79621 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CiitaP79621 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.36□□□□□ -0.43
CiitaP79621 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
CiitaP79621 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.36□□□□□ -0.43
CiitaP79621 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.36□□□□□ -0.43
CiitaP79621 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.36□□□□□ -0.43
CiitaP79621 Gm8194-201ENSMUST00000159783 859 ntBASIC12.36□□□□□ -0.43
CiitaP79621 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.36□□□□□ -0.43
CiitaP79621 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Gm29410-201ENSMUST00000188383 694 ntBASIC12.36□□□□□ -0.43
CiitaP79621 Gm42816-201ENSMUST00000198433 325 ntBASIC12.36□□□□□ -0.43
CiitaP79621 Gm43380-201ENSMUST00000200421 220 ntBASIC12.36□□□□□ -0.43
CiitaP79621 Gm42867-201ENSMUST00000202995 469 ntBASIC12.36□□□□□ -0.43
CiitaP79621 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.36□□□□□ -0.43
CiitaP79621 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.36□□□□□ -0.43
CiitaP79621 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.36□□□□□ -0.43
CiitaP79621 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CiitaP79621 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CiitaP79621 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.36□□□□□ -0.43
CiitaP79621 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.36□□□□□ -0.43
CiitaP79621 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CiitaP79621 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CiitaP79621 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.36□□□□□ -0.43
CiitaP79621 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CiitaP79621 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms