Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.05□□□□□ -0.8
Lsm6P62313 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.05□□□□□ -0.8
Lsm6P62313 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Lsm6P62313 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Lsm6P62313 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Lsm6P62313 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.05□□□□□ -0.8
Lsm6P62313 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.05□□□□□ -0.8
Lsm6P62313 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lsm6P62313 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.04□□□□□ -0.8
Lsm6P62313 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.04□□□□□ -0.8
Lsm6P62313 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Gm13809-201ENSMUST00000117921 597 ntBASIC10.04□□□□□ -0.8
Lsm6P62313 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.04□□□□□ -0.8
Lsm6P62313 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.04□□□□□ -0.8
Lsm6P62313 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lsm6P62313 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.04□□□□□ -0.8
Lsm6P62313 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Gm6439-201ENSMUST00000199849 862 ntBASIC10.04□□□□□ -0.8
Lsm6P62313 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 BC043934-202ENSMUST00000185694 2356 ntBASIC10.04□□□□□ -0.8
Lsm6P62313 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.04□□□□□ -0.8
Lsm6P62313 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.04□□□□□ -0.8
Lsm6P62313 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.04□□□□□ -0.8
Lsm6P62313 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lsm6P62313 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Lsm6P62313 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Lsm6P62313 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm6P62313 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.03□□□□□ -0.8
Lsm6P62313 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Lsm6P62313 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm12247-201ENSMUST00000117585 670 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Gm15566-201ENSMUST00000121130 590 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm22846-201ENSMUST00000157706 270 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Lsm6P62313 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Gm12407-201ENSMUST00000180219 324 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Lsm6P62313 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm8342-201ENSMUST00000209839 757 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms