Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Lsm3P62311 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lsm3P62311 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Lsm3P62311 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.32□□□□□ -0.76
Lsm3P62311 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm3P62311 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Lsm3P62311 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Lsm3P62311 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.31□□□□□ -0.76
Lsm3P62311 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Lsm3P62311 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Lsm3P62311 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Lsm3P62311 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Lsm3P62311 Gm12859-201ENSMUST00000117834 427 ntBASIC10.31□□□□□ -0.76
Lsm3P62311 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Lsm3P62311 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.31□□□□□ -0.76
Lsm3P62311 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.31□□□□□ -0.76
Lsm3P62311 Gm18187-201ENSMUST00000196476 984 ntBASIC10.31□□□□□ -0.76
Lsm3P62311 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.31□□□□□ -0.76
Lsm3P62311 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Gm15823-201ENSMUST00000064305 670 ntBASIC10.31□□□□□ -0.76
Lsm3P62311 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Gm10012-201ENSMUST00000078252 192 ntBASIC10.31□□□□□ -0.76
Lsm3P62311 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Lsm3P62311 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Lsm3P62311 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.31□□□□□ -0.76
Lsm3P62311 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.31□□□□□ -0.76
Lsm3P62311 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.31□□□□□ -0.76
Lsm3P62311 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Lsm3P62311 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.31□□□□□ -0.76
Lsm3P62311 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm3P62311 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.3□□□□□ -0.76
Lsm3P62311 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.3□□□□□ -0.76
Lsm3P62311 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.3□□□□□ -0.76
Lsm3P62311 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Gm43966-201ENSMUST00000203301 612 ntBASIC10.3□□□□□ -0.76
Lsm3P62311 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.3□□□□□ -0.76
Lsm3P62311 Gm9996-201ENSMUST00000070359 913 ntBASIC10.3□□□□□ -0.76
Lsm3P62311 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.3□□□□□ -0.76
Lsm3P62311 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms