Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.8□□□□□ -0.68
Nup43P59235 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nup43P59235 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.79□□□□□ -0.68
Nup43P59235 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.79□□□□□ -0.68
Nup43P59235 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.79□□□□□ -0.68
Nup43P59235 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.79□□□□□ -0.68
Nup43P59235 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.79□□□□□ -0.68
Nup43P59235 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.79□□□□□ -0.68
Nup43P59235 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.79□□□□□ -0.68
Nup43P59235 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.79□□□□□ -0.68
Nup43P59235 Gm18363-201ENSMUST00000221671 730 ntBASIC10.79□□□□□ -0.68
Nup43P59235 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nup43P59235 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nup43P59235 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.79□□□□□ -0.68
Nup43P59235 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup43P59235 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nup43P59235 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.79□□□□□ -0.68
Nup43P59235 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.79□□□□□ -0.68
Nup43P59235 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.78□□□□□ -0.68
Nup43P59235 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.78□□□□□ -0.68
Nup43P59235 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.78□□□□□ -0.68
Nup43P59235 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Gm12419-201ENSMUST00000116649 636 ntBASIC10.78□□□□□ -0.68
Nup43P59235 Gm11949-201ENSMUST00000117640 372 ntBASIC10.78□□□□□ -0.68
Nup43P59235 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.78□□□□□ -0.68
Nup43P59235 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.78□□□□□ -0.68
Nup43P59235 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.78□□□□□ -0.68
Nup43P59235 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.78□□□□□ -0.68
Nup43P59235 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.78□□□□□ -0.68
Nup43P59235 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
Nup43P59235 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.78□□□□□ -0.68
Nup43P59235 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Nup43P59235 Gm17825-201ENSMUST00000206836 794 ntBASIC10.78□□□□□ -0.68
Nup43P59235 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Gm45856-201ENSMUST00000212752 416 ntBASIC10.78□□□□□ -0.68
Nup43P59235 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.78□□□□□ -0.68
Nup43P59235 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.78□□□□□ -0.68
Nup43P59235 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms