Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubgcp3P58854 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubgcp3P58854 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubgcp3P58854 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubgcp3P58854 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubgcp3P58854 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubgcp3P58854 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubgcp3P58854 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubgcp3P58854 BC043934-202ENSMUST00000185694 2356 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Gm14058-201ENSMUST00000116082 735 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Gm13035-201ENSMUST00000117496 342 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Gm11450-201ENSMUST00000121144 333 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Gm7150-201ENSMUST00000122032 981 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Gm6108-201ENSMUST00000208365 367 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.65□□□□□ -0.54
Tubgcp3P58854 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubgcp3P58854 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tubgcp3P58854 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubgcp3P58854 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tubgcp3P58854 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Gm12997-201ENSMUST00000120207 640 ntBASIC11.64□□□□□ -0.55
Tubgcp3P58854 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.64□□□□□ -0.55
Tubgcp3P58854 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.64□□□□□ -0.55
Tubgcp3P58854 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubgcp3P58854 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.63□□□□□ -0.55
Tubgcp3P58854 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubgcp3P58854 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubgcp3P58854 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms