Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CtskP55097 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
CtskP55097 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.32□□□□□ -0.6
CtskP55097 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.32□□□□□ -0.6
CtskP55097 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.32□□□□□ -0.6
CtskP55097 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CtskP55097 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Gm3150-201ENSMUST00000166418 204 ntBASIC11.32□□□□□ -0.6
CtskP55097 Gm25072-201ENSMUST00000175233 235 ntBASIC11.32□□□□□ -0.6
CtskP55097 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.32□□□□□ -0.6
CtskP55097 Gm12407-201ENSMUST00000180219 324 ntBASIC11.32□□□□□ -0.6
CtskP55097 Mir6998-201ENSMUST00000183343 64 ntBASIC11.32□□□□□ -0.6
CtskP55097 Gm28324-201ENSMUST00000187913 264 ntBASIC11.32□□□□□ -0.6
CtskP55097 Gm44329-201ENSMUST00000197469 112 ntBASIC11.32□□□□□ -0.6
CtskP55097 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.32□□□□□ -0.6
CtskP55097 Gm6108-201ENSMUST00000208365 367 ntBASIC11.32□□□□□ -0.6
CtskP55097 Gm45072-201ENSMUST00000208673 929 ntBASIC11.32□□□□□ -0.6
CtskP55097 Gm17917-201ENSMUST00000218561 953 ntBASIC11.32□□□□□ -0.6
CtskP55097 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.32□□□□□ -0.6
CtskP55097 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.32□□□□□ -0.6
CtskP55097 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.32□□□□□ -0.6
CtskP55097 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.32□□□□□ -0.6
CtskP55097 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.32□□□□□ -0.6
CtskP55097 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CtskP55097 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CtskP55097 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.31□□□□□ -0.6
CtskP55097 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
CtskP55097 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Gm14776-201ENSMUST00000121029 887 ntBASIC11.31□□□□□ -0.6
CtskP55097 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.31□□□□□ -0.6
CtskP55097 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC11.31□□□□□ -0.6
CtskP55097 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CtskP55097 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CtskP55097 Gm3551-201ENSMUST00000190750 664 ntBASIC11.31□□□□□ -0.6
CtskP55097 Gm29747-201ENSMUST00000194764 585 ntBASIC11.31□□□□□ -0.6
CtskP55097 Gm42518-201ENSMUST00000196277 938 ntBASIC11.31□□□□□ -0.6
CtskP55097 Gm6450-201ENSMUST00000200896 574 ntBASIC11.31□□□□□ -0.6
CtskP55097 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.31□□□□□ -0.6
CtskP55097 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.31□□□□□ -0.6
CtskP55097 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.31□□□□□ -0.6
CtskP55097 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CtskP55097 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CtskP55097 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CtskP55097 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.31□□□□□ -0.6
CtskP55097 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
CtskP55097 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.31□□□□□ -0.6
CtskP55097 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
CtskP55097 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.31□□□□□ -0.6
CtskP55097 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.31□□□□□ -0.6
CtskP55097 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.31□□□□□ -0.6
CtskP55097 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.31□□□□□ -0.6
CtskP55097 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CtskP55097 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms