Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Gm44958-201ENSMUST00000203734 736 ntBASIC12.06□□□□□ -0.48
LmnaP48678 Gm43974-201ENSMUST00000205080 684 ntBASIC12.06□□□□□ -0.48
LmnaP48678 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.06□□□□□ -0.48
LmnaP48678 Gm35713-201ENSMUST00000210516 199 ntBASIC12.06□□□□□ -0.48
LmnaP48678 Mt1-202ENSMUST00000211807 1085 ntBASIC12.06□□□□□ -0.48
LmnaP48678 Gm6722-201ENSMUST00000221586 390 ntBASIC12.06□□□□□ -0.48
LmnaP48678 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LmnaP48678 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LmnaP48678 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.06□□□□□ -0.48
LmnaP48678 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
LmnaP48678 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.06□□□□□ -0.48
LmnaP48678 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LmnaP48678 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
LmnaP48678 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LmnaP48678 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
LmnaP48678 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.05□□□□□ -0.48
LmnaP48678 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LmnaP48678 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LmnaP48678 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LmnaP48678 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.05□□□□□ -0.48
LmnaP48678 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.05□□□□□ -0.48
LmnaP48678 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.05□□□□□ -0.48
LmnaP48678 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Gm17877-201ENSMUST00000192578 814 ntBASIC12.05□□□□□ -0.48
LmnaP48678 Gm9645-201ENSMUST00000197131 792 ntBASIC12.05□□□□□ -0.48
LmnaP48678 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Gm44980-201ENSMUST00000205826 314 ntBASIC12.05□□□□□ -0.48
LmnaP48678 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LmnaP48678 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
LmnaP48678 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LmnaP48678 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
LmnaP48678 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LmnaP48678 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.04□□□□□ -0.48
LmnaP48678 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.04□□□□□ -0.48
LmnaP48678 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.04□□□□□ -0.48
LmnaP48678 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.04□□□□□ -0.48
LmnaP48678 Gm8737-201ENSMUST00000122208 642 ntBASIC12.04□□□□□ -0.48
LmnaP48678 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.04□□□□□ -0.48
LmnaP48678 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.04□□□□□ -0.48
LmnaP48678 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.04□□□□□ -0.48
LmnaP48678 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Gm2875-201ENSMUST00000211333 360 ntBASIC12.04□□□□□ -0.48
LmnaP48678 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 AC154848.1-201ENSMUST00000225451 846 ntBASIC12.04□□□□□ -0.48
LmnaP48678 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LmnaP48678 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LmnaP48678 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LmnaP48678 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.04□□□□□ -0.48
LmnaP48678 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms