Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.82□□□□□ -0.68
Nkx2-6P43688 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm8197-202ENSMUST00000193422 934 ntBASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.82□□□□□ -0.68
Nkx2-6P43688 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm17825-201ENSMUST00000206836 794 ntBASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm10263-201ENSMUST00000085163 300 ntBASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.82□□□□□ -0.68
Nkx2-6P43688 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-6P43688 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm15374-201ENSMUST00000119313 844 ntBASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm6407-201ENSMUST00000176468 549 ntBASIC10.81□□□□□ -0.68
Nkx2-6P43688 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm37826-201ENSMUST00000195329 322 ntBASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm42816-201ENSMUST00000198433 325 ntBASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm3726-201ENSMUST00000203110 785 ntBASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.81□□□□□ -0.68
Nkx2-6P43688 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm5805-201ENSMUST00000072779 456 ntBASIC10.81□□□□□ -0.68
Nkx2-6P43688 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms