Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.78□□□□□ -0.52
Msh2P43247 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.77□□□□□ -0.52
Msh2P43247 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Msh2P43247 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Msh2P43247 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.77□□□□□ -0.52
Msh2P43247 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.77□□□□□ -0.53
Msh2P43247 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Msh2P43247 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.77□□□□□ -0.53
Msh2P43247 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 Gm18730-201ENSMUST00000218038 343 ntBASIC11.77□□□□□ -0.53
Msh2P43247 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.77□□□□□ -0.53
Msh2P43247 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.77□□□□□ -0.53
Msh2P43247 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.77□□□□□ -0.53
Msh2P43247 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.77□□□□□ -0.53
Msh2P43247 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Msh2P43247 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.77□□□□□ -0.53
Msh2P43247 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Msh2P43247 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Msh2P43247 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.76□□□□□ -0.53
Msh2P43247 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.76□□□□□ -0.53
Msh2P43247 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Msh2P43247 Gm43184-201ENSMUST00000197247 542 ntBASIC11.76□□□□□ -0.53
Msh2P43247 Gm18038-201ENSMUST00000197900 485 ntBASIC11.76□□□□□ -0.53
Msh2P43247 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Gm4157-201ENSMUST00000211647 679 ntBASIC11.76□□□□□ -0.53
Msh2P43247 Gm5363-201ENSMUST00000211927 938 ntBASIC11.76□□□□□ -0.53
Msh2P43247 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.76□□□□□ -0.53
Msh2P43247 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Msh2P43247 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Msh2P43247 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.76□□□□□ -0.53
Msh2P43247 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms